Evaluation of the reference genes in human adipose tissue and lipoma samples
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Almeida-Oliveira, F., Leandro, J.G.B., Ausina, P., Sola-Penna, M., Majerowicz, D. 2017: Reference genes for quantitative PCR in the adipose tissue of mice with metabolic disease. Biomedicine & Pharmacotherapy, 88: 948-955.
Andersen, C.L., Jensen, J.L., Ørntoft, T.F. 2004: Normalization of real-time quantitative reverse transcription-PCR data: a model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets. Cancer Research, 64(15): 5245-50.
Bustin, S.A. 2002: Quantification of mRNA using real-time reverse transcription PCR (RT-PCR): trends and problems. Journal of Molecular Endocrinology, 29(1): 23-39.
Bustin, S.A., Nolan, T. 2004: Pitfalls of quantitative real-time reverse-transcription polymerase chain reaction. Journal of Biomolecular Techniques, 15(3): 155-66.
Caracausi, M., Piovesan, A., Antonaros, F., Strippoli, P., Vitale, L., Pelleri, M.C. 2017: Systematic identification of human housekeeping genes possibly useful as references in gene expression studies. Molecular Medicine Reports, 16(3): 2397–2410.
Derveaux, S., Vandesompele, J., Hellemans, J. 2010: How to do successful gene expression analysis using real-time PCR. Methods, 50(4): 227-30.
De Spiegelaere, W., Dern-Wieloch, J., Weigel, R., Schumacher, V., Schorle, H., Nettersheim, D., Bergmann, M., Brehm, R., Kliesch, S., Vandekerckhove, L., Fink, C. 2015: Reference gene validation for RT-qPCR, a note on different available software packages. PLoS One, 10(3): e0122515.
Dessels, C., Pepper, M.S. 2019: Reference Gene Expression in Adipose-Derived Stromal Cells Undergoing Adipogenic Differentiation. Tissue Engineering. Part C, Methods, 25(6): 353-366.
Dheda, K., Huggett, J.F., Bustin, S.A., Johnson, M.A., Rook, G., Zumla, A. 2004: Validation of housekeeping genes for normalizing RNA expression in real-time PCR. Biotechniques, 37(1): 112-4, 116, 118-9.
Eisenberg, E., Levanon, E.Y. 2013: Human housekeeping genes, revisited. Trends in Genetics, 29(10): 569-74.
Gabrielsson, B.G., Olofsson, L.E., Sjögren, A., Jernås, M., Elander, A., Lönn, M., Rudemo, M., Carlsson, L.M. 2005: Evaluation of reference genes for studies of gene expression in human adipose tissue. Obesity research, 13(4): 649-52.
Gorzelniak, K., Janke, J., Engeli, S., Sharma, A.M. 2001: Validation of endogenous controls for gene expression studies in human adipocytes and preadipocytes. Hormone and Metabolic Research, 33(10): 625-7.
Hurtado del Pozo, C., Calvo, R.M., Vesperinas-García, G., Gómez-Ambrosi, J., Frühbeck, G., Corripio-Sánchez, R., Rubio, M.A., Obregon, M.J. 2010: IPO8 and FBXL10: new reference genes for gene expression studies in human adipose tissue. Obesity, 18(5): 897-903.
Mohammed, U., Samaila, M.O., Abubakar, M. 2014: Pattern of adipose tissue tumors in Ahmadu Bello University Teaching Hospital, Zaria, Nigeria. Annals of Nigerian Medicine, 8(1): 8–10.
Omonte, S.V., de Andrade, B.A., Leal, R.M., Capistrano, H.M., Souza, P.E., Horta, M.C. 2016: Osteolipoma: A rare tumor in the oral cavity. Oral Surgery, Oral Medicine, Oral Pathology and Oral Radiology, 122(1): e8–e13.
Perez, L.J., Rios, L., Trivedi, P., D'Souza, K., Cowie, A., Nzirorera, C., Webster, D., Brunt, K., Legare, J.F., Hassan, A., Kienesberger, P.C., Pulinilkunnil, T. 2017: Validation of optimal reference genes for quantitative real time PCR in muscle and adipose tissue for obesity and diabetes research. Scientific Reports, 7(1): 3612.
Pérez, S., Royo, L.J., Astudillo, A., Escudero, D., Alvarez, F., Rodríguez, A., Gómez, E., Otero, J. 2007: Identifying the most suitable endogenous control for determining gene expression in hearts from organ donors. BMC Molecular Biology, 8: 114.
Radonić, A., Thulke, S., Mackay, I.M., Landt, O., Siegert, W., Nitsche, A. 2004: Guideline to reference gene selection for quantitative real-time PCR. Biochemical and Biophysical Research Communications, 313(4): 856-62.
Schmittgen, T.D., Zakrajsek, B.A. 2000: Effect of experimental treatment on housekeeping gene expression: validation by real-time, quantitative RT-PCR. Journal of Biochemical and Biophysical Methods, 46: 69-81.
Stojanović, S., Najman, S. 2019: The Effect of Conditioned Media of Stem Cells Derived from Lipoma and Adipose Tissue on Macrophages’ Response and Wound Healing in Indirect Co-culture System In Vitro. International Journal of Molecular Sciences, 20(7): 1671.
Stojanović, S., Najman, S., Korać, A. 2018: Stem Cells Derived from Lipoma and Adipose Tissue—Similar Mesenchymal Phenotype but Different Differentiation Capacity Governed by Distinct Molecular Signature. Cells, 7(12): 260.
Suzuki, T., Higgins, P.J., Crawford, D.R. 2000: Control selection for RNA quantitation. Biotechniques, 29: 332-7.
Taube, M., Andersson-Assarsson, J.C., Lindberg, K., Pereira, M.J., Gäbel, M., Svensson, M.K., Eriksson, J.W., Svensson, P.A. 2015: Evaluation of reference genes for gene expression studies in human brown adipose tissue. Adipocyte, 4(4): 280-5.
Thellin, O., Zorzi, W., Lakaye, B., De Borman, B., Coumans, B., Hennen, G., Grisar, T., Igout, A., Heinen, E. 1999: Housekeeping genes as internal standards: use and limits. Journal of Biotechnology, 75(2-3): 291-5.
Tricarico, C., Pinzani, P., Bianchi, S., Paglierani, M., Distante, V., Pazzagli, M., Bustin, S.A., Orlando, C. 2002: Quantitative real-time reverse transcription polymerase chain reaction: normalization to rRNA or single housekeeping genes is inappropriate for human tissue biopsies. Analytical Biochemistry, 309(2): 293-300.
Warrington, J.A., Nair, A., Mahadevappa, M., Tsyganskaya, M. 2000: Comparison of human adult and fetal expression and identification of 535 housekeeping/maintenance genes. Physiological Genomics, 2: 143-7.
Zhang, W.X., Fan, J., Ma, J., Rao, Y.S., Zhang, L., Yan, Y.E. 2016: Selection of Suitable Reference Genes for Quantitative Real-Time PCR Normalization in Three Types of Rat Adipose Tissue. International Journal of Molecular Sciences, 17(6): E968.
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